STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y5X0_BRAFLMacro domain-containing protein. (970 aa)    
Predicted Functional Partners:
C3Y5X1_BRAFL
Uncharacterized protein.
  
 
0.565
C3YS02_BRAFL
Poly [ADP-ribose] polymerase.
  
 
 0.559
C3Y406_BRAFL
Poly [ADP-ribose] polymerase.
  
 
0.457
C3Y6H9_BRAFL
Poly [ADP-ribose] polymerase.
  
 
0.456
C3Y5X5_BRAFL
Poly [ADP-ribose] polymerase.
  
 
0.454
C3Y6H4_BRAFL
Poly [ADP-ribose] polymerase.
  
 
0.454
C3Y5X2_BRAFL
Poly [ADP-ribose] polymerase.
   
 
 0.441
C3Y5X3_BRAFL
Poly [ADP-ribose] polymerase.
   
 
 0.441
C3YRW3_BRAFL
Poly [ADP-ribose] polymerase.
   
 
 0.441
C3Y5P2_BRAFL
Poly [ADP-ribose] polymerase.
  
 
0.434
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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