STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y6Y8_BRAFLMethyltranfer_dom domain-containing protein. (262 aa)    
Predicted Functional Partners:
C3YPR3_BRAFL
RabBD domain-containing protein.
    
 0.752
C3ZQN2_BRAFL
PDZ domain-containing protein.
    
 0.752
C3ZQN3_BRAFL
C2 domain-containing protein.
    
 0.752
C3Y7R3_BRAFL
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.640
C3XW86_BRAFL
TPR_REGION domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
  
 0.515
rab-GDI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.493
C3XQ82_BRAFL
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.478
C3ZAP3_BRAFL
ATP-grasp domain-containing protein.
   
 0.471
C3YZ95_BRAFL
Uncharacterized protein.
    
 0.469
C3YJC3_BRAFL
J domain-containing protein.
     
 0.467
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (22%) [HD]