STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y7T8_BRAFLRRM domain-containing protein. (183 aa)    
Predicted Functional Partners:
C3YNV4_BRAFL
Uncharacterized protein.
   
 0.617
C3ZVZ3_BRAFL
Uncharacterized protein.
   
 0.570
C3YJZ1_BRAFL
Nuclear cap-binding protein subunit 2.
   
 0.557
C3YFE9_BRAFL
Uncharacterized protein.
  
0.554
C3YN71_BRAFL
Uncharacterized protein.
  
   
 0.550
C3XU90_BRAFL
Uncharacterized protein.
   
 0.542
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.532
C3Y2C6_BRAFL
MIF4G domain-containing protein.
   
 0.517
C3Y0R8_BRAFL
Uncharacterized protein.
  
     0.512
C3Y3M6_BRAFL
Uncharacterized protein.
   
 0.490
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.