STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YA14_BRAFLUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (601 aa)    
Predicted Functional Partners:
C3YMM8_BRAFL
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.879
C3Y4X3_BRAFL
Uncharacterized protein.
    
 0.834
C3ZUG6_BRAFL
Uncharacterized protein.
    
 0.765
C3ZXI3_BRAFL
TAZ-type domain-containing protein.
    
 0.765
C3XSV0_BRAFL
TAZ-type domain-containing protein.
    
 0.745
C3Y7C9_BRAFL
TAZ-type domain-containing protein.
    
 0.669
C3XV35_BRAFL
Uncharacterized protein.
   
 0.660
C3Z0M6_BRAFL
HDAC_interact domain-containing protein.
   
 
 0.657
C3XPP5_BRAFL
Uncharacterized protein.
    
 
 0.642
C3XPP6_BRAFL
Uncharacterized protein.
    
 
 0.642
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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