STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YD80_BRAFLSerine/threonine-protein phosphatase. (320 aa)    
Predicted Functional Partners:
C3YV49_BRAFL
Uncharacterized protein.
   
 0.958
C3Y0T8_BRAFL
SMK-1 domain-containing protein.
   
 
 0.899
C3ZF16_BRAFL
Uncharacterized protein.
    
 
 0.891
C3ZCJ5_BRAFL
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.743
C3Y3Z9_BRAFL
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.731
C3ZBN8_BRAFL
WRNPLPNID domain-containing protein.
    
 0.698
C3ZLD5_BRAFL
Uncharacterized protein.
   
 0.674
C3ZWW7_BRAFL
COR domain-containing protein.
   
 0.674
C3Y7B6_BRAFL
Uncharacterized protein.
    
 0.669
C3Z3S3_BRAFL
Uncharacterized protein.
    
 0.653
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.