STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YEC4_BRAFLAmidohydro-rel domain-containing protein. (70 aa)    
Predicted Functional Partners:
C3YXK9_BRAFL
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.860
C3Z1V5_BRAFL
Uncharacterized protein.
  
 
 0.738
C3YCJ1_BRAFL
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
 0.708
C3ZXV8_BRAFL
OMPdecase domain-containing protein.
  
  
 0.708
C3YFF0_BRAFL
DHO_dh domain-containing protein.
  
 0.704
C3YHI6_BRAFL
Uncharacterized protein.
  
 
 0.620
C3Z8K6_BRAFL
FAD-binding FR-type domain-containing protein.
  
 
 0.618
C3ZBC0_BRAFL
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 
 0.618
C3ZZG9_BRAFL
Oxidoreductase-like domain-containing protein.
  
 
 0.618
C3XVD7_BRAFL
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
 0.577
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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