STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YF20_BRAFLUncharacterized protein. (994 aa)    
Predicted Functional Partners:
C3YWY2_BRAFL
DUF862 domain-containing protein.
    
   0.933
C3Y071_BRAFL
DUF862 domain-containing protein.
    
   0.769
C3ZWB9_BRAFL
Uncharacterized protein; Belongs to the BI1 family.
   
  
 0.666
C3Z2C5_BRAFL
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.610
C3ZRU7_BRAFL
Uncharacterized protein.
   
  
 0.604
C3Z7P4_BRAFL
DNA ligase.
      
 0.578
C3ZE29_BRAFL
Uncharacterized protein.
      
 0.577
C3Y0Q2_BRAFL
Uncharacterized protein.
      
 0.546
C3ZMD6_BRAFL
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.539
C3YFR4_BRAFL
VWFA domain-containing protein.
      
 0.517
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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