STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YFM1_BRAFLPRELI/MSF1 domain-containing protein. (207 aa)    
Predicted Functional Partners:
C3XVM0_BRAFL
Uncharacterized protein.
    
 0.987
C3Y3L9_BRAFL
PRELI/MSF1 domain-containing protein.
  
 
0.843
C3Y9H2_BRAFL
Josephin domain-containing protein.
      
 0.706
C3YPU3_BRAFL
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.538
C3YR73_BRAFL
Uncharacterized protein.
      
 0.538
C3ZGW2_BRAFL
Protein-serine/threonine kinase.
      
 0.538
C3YDN0_BRAFL
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.
      
 0.506
C3Z9M2_BRAFL
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
      
 0.506
C3ZQS6_BRAFL
Uncharacterized protein.
      
 0.504
C3XW61_BRAFL
DRBM domain-containing protein.
   
  
 0.471
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.