STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YFS7_BRAFLElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (463 aa)    
Predicted Functional Partners:
C3Y0K8_BRAFL
Uncharacterized protein.
   
 0.997
C3XVK6_BRAFL
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.930
C3Z5W1_BRAFL
Uncharacterized protein.
 
    
 0.903
C3YFS9_BRAFL
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 
0.900
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.802
C3Y4D8_BRAFL
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.802
C3YTK3_BRAFL
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.767
C3YKR3_BRAFL
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.735
C3ZHP5_BRAFL
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.693
C3YZV7_BRAFL
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.692
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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