STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YH99_BRAFLADP-riboslyation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. (186 aa)    
Predicted Functional Partners:
C3ZVY1_BRAFL
Protein kinase domain-containing protein.
    
 0.899
C3ZVY2_BRAFL
Uncharacterized protein.
    
 0.899
C3ZLK0_BRAFL
Uncharacterized protein.
    
 0.770
C3ZLK1_BRAFL
Uncharacterized protein.
    
 0.770
C3XY98_BRAFL
AP complex subunit beta.
   
 0.725
C3XTT3_BRAFL
AP-1 complex subunit gamma.
    
 0.718
C3Y8C0_BRAFL
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.696
C3ZF04_BRAFL
Arf-GAP domain-containing protein.
   
 0.691
C3Y7L1_BRAFL
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.682
C3ZCC0_BRAFL
Uncharacterized protein.
   
 0.671
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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