STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YJ40_BRAFLCTLH domain-containing protein. (467 aa)    
Predicted Functional Partners:
C3XZ79_BRAFL
WD_REPEATS_REGION domain-containing protein.
  
 0.984
C3ZQT3_BRAFL
Uncharacterized protein.
    
 
 0.966
C3ZB93_BRAFL
Uncharacterized protein.
  
 
 0.945
C3ZB92_BRAFL
B30.2/SPRY domain-containing protein.
  
 
 0.940
C3YYS2_BRAFL
Uncharacterized protein.
    
 0.912
C3XYY3_BRAFL
Uncharacterized protein.
    
 
 0.877
C3ZF06_BRAFL
B30.2/SPRY domain-containing protein.
   
 
 0.843
C3YJ68_BRAFL
LisH domain-containing protein.
    
 0.771
C3YVK4_BRAFL
Uncharacterized protein.
    
 
 0.710
C3ZTH1_BRAFL
MYND-type domain-containing protein.
    
 
 0.690
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.