STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YJA0_BRAFLUncharacterized protein. (851 aa)    
Predicted Functional Partners:
C3ZBT4_BRAFL
NAGPA domain-containing protein.
     
 
0.900
C3ZBT6_BRAFL
NAGPA domain-containing protein.
     
 
0.900
C3ZSN8_BRAFL
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.598
C3XZR3_BRAFL
Uncharacterized protein.
      
 0.578
C3ZEX9_BRAFL
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.578
C3YK11_BRAFL
NAD(P)-bd_dom domain-containing protein.
   
  
 0.571
C3XTN6_BRAFL
C5-epim_C domain-containing protein.
      
 0.538
C3ZPF5_BRAFL
Uncharacterized protein.
    
 
 0.526
C3ZCK7_BRAFL
Fam20C domain-containing protein.
      
 0.522
C3YMV1_BRAFL
Uncharacterized protein; Belongs to the glycosyltransferase 47 family.
      
 0.509
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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