STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YJJ8_BRAFLUncharacterized protein. (359 aa)    
Predicted Functional Partners:
C3XU15_BRAFL
Uncharacterized protein.
   
 0.967
C3ZMG1_BRAFL
E2F_TDP domain-containing protein.
  
 0.967
C3Z8A2_BRAFL
RB_A domain-containing protein.
   
 0.940
C3Y411_BRAFL
E2F_CC-MB domain-containing protein.
   
 0.819
C3ZBS5_BRAFL
E2F_TDP domain-containing protein.
   
 0.819
C3Y680_BRAFL
DIRP domain-containing protein.
   
 0.805
C3Z4N9_BRAFL
CRC domain-containing protein.
   
 0.793
C3YGP1_BRAFL
Uncharacterized protein.
    
 0.769
C3ZNJ6_BRAFL
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.704
C3YZA3_BRAFL
FCS-type domain-containing protein.
   
 0.696
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.