STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YK67_BRAFLProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (312 aa)    
Predicted Functional Partners:
C3YLH0_BRAFL
Tyrosine-protein phosphatase domain-containing protein.
   
 0.800
C3YUH5_BRAFL
Uncharacterized protein.
  
0.796
C3ZCZ0_BRAFL
SH3 domain-containing protein.
   
 0.769
C3YCU1_BRAFL
LIM zinc-binding domain-containing protein.
   
 0.753
C3ZYB2_BRAFL
LIM zinc-binding domain-containing protein.
   
 0.753
C3Y4J7_BRAFL
Uncharacterized protein.
   
 0.751
C3YZ48_BRAFL
Uncharacterized protein.
    
 0.735
C3YCZ1_BRAFL
SH3 domain-containing protein.
   
 0.721
C3YWW9_BRAFL
SH3 domain-containing protein.
    
 0.713
C3Y1A5_BRAFL
Focal_AT domain-containing protein.
   
 0.691
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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