STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YM20_BRAFLF-box domain-containing protein. (421 aa)    
Predicted Functional Partners:
C3YB87_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.998
C3YP57_BRAFL
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.998
C3XXN0_BRAFL
RING-type domain-containing protein.
    
 0.989
C3YZV0_BRAFL
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.983
C3YUU6_BRAFL
Uncharacterized protein.
    
 0.977
C3ZDY2_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.967
C3YNN9_BRAFL
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.963
C3ZJB9_BRAFL
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.963
C3ZJ75_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
 0.929
C3ZRF6_BRAFL
Ubiquitin-like domain-containing protein.
    
 0.901
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.