STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YNI4_BRAFLRanBP2-type domain-containing protein. (73 aa)    
Predicted Functional Partners:
C3ZPC6_BRAFL
RING-type domain-containing protein.
    
 0.982
C3YBD9_BRAFL
CXXC-type domain-containing protein.
    
 
 0.924
C3Z408_BRAFL
Uncharacterized protein.
    
 
 0.924
C3Z409_BRAFL
F-box domain-containing protein.
    
 
 0.924
C3YW14_BRAFL
RING-type domain-containing protein.
    
 0.906
C3YZA3_BRAFL
FCS-type domain-containing protein.
    
 0.898
C3Y3R1_BRAFL
RING-type domain-containing protein.
    
 0.848
C3YJ50_BRAFL
Uncharacterized protein.
    
 0.820
C3ZTD4_BRAFL
RING-type domain-containing protein.
    
 0.820
C3XQN1_BRAFL
Uncharacterized protein.
    
 0.775
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.