STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YPU3_BRAFLMitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (266 aa)    
Predicted Functional Partners:
C3Z939_BRAFL
CHCH domain-containing protein.
    
 
 0.758
C3Z629_BRAFL
Prohibitin.
    
 
 0.734
C3ZQC8_BRAFL
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
      
 0.710
C3YCD9_BRAFL
Peptidase_M48 domain-containing protein.
    
 
 0.707
ATP6
ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...]
    
 
 0.698
C3XXJ8_BRAFL
AMP_N domain-containing protein.
      
 0.584
C3Z646_BRAFL
zf-Tim10_DDP domain-containing protein.
   
 
 0.562
C3XVM0_BRAFL
Uncharacterized protein.
      
 0.538
C3YFM1_BRAFL
PRELI/MSF1 domain-containing protein.
      
 0.538
C3YHV5_BRAFL
PHB domain-containing protein.
    
 
 0.532
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.