STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YV50_BRAFLUncharacterized protein. (208 aa)    
Predicted Functional Partners:
C3Y922_BRAFL
Uncharacterized protein.
   
 0.996
C3ZVY1_BRAFL
Protein kinase domain-containing protein.
   
 0.968
C3ZVY2_BRAFL
Uncharacterized protein.
   
 0.968
C3YPS8_BRAFL
Uncharacterized protein.
    
 
 0.940
rab-GDI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.752
C3YPL0_BRAFL
Uncharacterized protein.
   
 0.658
C3YVW2_BRAFL
Uncharacterized protein.
   
 0.658
gamt3
Ubiquitin-like domain-containing protein.
   
 0.654
C3Y1S4_BRAFL
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.623
C3YZ95_BRAFL
Uncharacterized protein.
    
 0.601
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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