STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YW19_BRAFLMyostatin. (342 aa)    
Predicted Functional Partners:
C3Z070_BRAFL
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.879
C3Z0I4_BRAFL
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.625
C4A0B6_BRAFL
Tyrosine-protein kinase receptor.
    
 0.618
C3Z5A4_BRAFL
GS domain-containing protein.
  
 
 0.612
C3YDQ8_BRAFL
Mothers against decapentaplegic homolog.
    
 0.592
C3ZVQ9_BRAFL
c-SKI_SMAD_bind domain-containing protein.
    
 
 0.544
C3Z0I2_BRAFL
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.535
C3Z5A3_BRAFL
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.535
C3XSS3_BRAFL
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.530
C3ZEE6_BRAFL
DNA polymerase.
      
 0.513
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.