STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YWJ9_BRAFLFIP-RBD domain-containing protein. (344 aa)    
Predicted Functional Partners:
C3YDX8_BRAFL
Uncharacterized protein.
    
 0.941
C3YLR1_BRAFL
Uncharacterized protein.
    
 0.941
C3ZXT6_BRAFL
Uncharacterized protein.
    
 0.941
C3XZB9_BRAFL
Homeobox domain-containing protein.
    
   0.933
C3Y7J5_BRAFL
Uncharacterized protein.
    
 0.869
C3Y8C0_BRAFL
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.856
C3Y7P8_BRAFL
Sec2p domain-containing protein.
    
 0.818
C3YMP9_BRAFL
Uncharacterized protein.
    
 0.761
C3Y9B1_BRAFL
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.753
C3ZIQ9_BRAFL
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.724
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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