STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YXK6_BRAFLUncharacterized protein. (247 aa)    
Predicted Functional Partners:
C3XWC7_BRAFL
FDX-ACB domain-containing protein.
  
  
 0.846
C3ZLP6_BRAFL
HRDC domain-containing protein.
   
 
 0.827
EFTS_BRAFL
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
  
  
 0.745
C3XRD8_BRAFL
Uncharacterized protein.
  
  
 0.738
C3Y385_BRAFL
Tr-type G domain-containing protein.
  
  
 0.738
C3YCE6_BRAFL
S4 RNA-binding domain-containing protein.
  
  
 0.710
C3YJC4_BRAFL
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
  
 0.710
C3XPZ2_BRAFL
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
  
 0.704
C3XZ88_BRAFL
Uncharacterized protein.
  
    0.703
C3XPK3_BRAFL
Uncharacterized protein.
  
  
 0.690
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (12%) [HD]