STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z0C9_BRAFLUncharacterized protein. (191 aa)    
Predicted Functional Partners:
C3YQL5_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
 0.559
C3Z8G3_BRAFL
Ipi1_N domain-containing protein.
   
 0.530
C3Z8S3_BRAFL
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.516
C3XZ42_BRAFL
Uncharacterized protein.
   
 0.476
C3YK90_BRAFL
Ig-like domain-containing protein.
  
 
  0.469
C3ZMD3_BRAFL
Uncharacterized protein.
  
     0.432
C3ZBQ5_BRAFL
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.410
C3Z4A6_BRAFL
Uncharacterized protein.
  
   0.402
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.