STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z1I0_BRAFLPKS_ER domain-containing protein. (301 aa)    
Predicted Functional Partners:
C3YKQ6_BRAFL
Fe-ADH domain-containing protein.
  
 0.974
C3XYZ3_BRAFL
MADS-box domain-containing protein.
    
 0.838
C3XX71_BRAFL
Uncharacterized protein.
  
  
 0.809
C3YP06_BRAFL
ADH_N domain-containing protein.
 
 
 0.745
C3YP07_BRAFL
ADH_N domain-containing protein.
 
 
 0.691
C3Y067_BRAFL
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.668
C3ZKY5_BRAFL
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.668
C3YI98_BRAFL
PKS_ER domain-containing protein.
 
 0.661
C3YBS4_BRAFL
Uncharacterized protein.
 
 0.659
C3YBS5_BRAFL
PKS_ER domain-containing protein.
 
 0.657
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.