STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z1Z2_BRAFLDeacetylase sirtuin-type domain-containing protein. (267 aa)    
Predicted Functional Partners:
C3YPK5_BRAFL
Uncharacterized protein.
     
 0.935
C3ZLT0_BRAFL
Uncharacterized protein.
  
 
 0.918
C3YQ71_BRAFL
Uncharacterized protein.
    
 0.913
C3ZRV1_BRAFL
PNP_UDP_1 domain-containing protein.
    
 0.909
C3YQ60_BRAFL
Uncharacterized protein.
  
 
 0.902
C3Y484_BRAFL
Uncharacterized protein.
    
  0.900
C3YKX2_BRAFL
Deacetylase sirtuin-type domain-containing protein.
  
 
0.710
C3Y3W0_BRAFL
Uncharacterized protein.
   
 0.698
C3YI59_BRAFL
Fork-head domain-containing protein.
    
 0.695
C3YQC3_BRAFL
Fork-head domain-containing protein.
    
 0.695
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.