STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z2F6_BRAFLBTB domain-containing protein. (167 aa)    
Predicted Functional Partners:
C3YWE6_BRAFL
PCI domain-containing protein.
    
  0.475
C3YVJ7_BRAFL
E2_bind domain-containing protein.
   
 
  0.465
C3Y4V3_BRAFL
Uncharacterized protein.
   
 
  0.456
C3YB87_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.420
C3ZDY2_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.420
C3Y293_BRAFL
MPN domain-containing protein.
    
  0.413
C3YQ29_BRAFL
Uncharacterized protein.
    
  0.413
C3Z8B3_BRAFL
MPN domain-containing protein.
    
  0.409
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.