STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z2J6_BRAFLKLRAQ domain-containing protein. (785 aa)    
Predicted Functional Partners:
C3Y1B5_BRAFL
FHA domain-containing protein.
    
   0.933
C3ZLK2_BRAFL
PKS_ER domain-containing protein.
    
   0.867
Ledxa.1
Linked to engrailed and distalless homeobox a.
    
   0.862
C3XSN0_BRAFL
Linked to engrailed and distalless homeobox b.
    
   0.862
C3Y280_BRAFL
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.862
C3YFN4_BRAFL
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.862
C3Y695_BRAFL
Uncharacterized protein.
    
 
 0.713
C3XXQ4_BRAFL
Uncharacterized protein.
    
 
 0.546
C3YZ79_BRAFL
Uncharacterized protein.
      
 0.501
C3YXD7_BRAFL
PKS_ER domain-containing protein.
    
   0.470
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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