STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z2P3_BRAFLPoly [ADP-ribose] polymerase. (516 aa)    
Predicted Functional Partners:
C3XR76_BRAFL
Poly [ADP-ribose] polymerase.
  
  
 
0.913
C3Z5C9_BRAFL
Uncharacterized protein.
    
 0.846
C3ZES4_BRAFL
Uncharacterized protein.
    
 0.666
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.663
C3ZZJ5_BRAFL
FHA_2 domain-containing protein.
    
 
 0.659
C3YAV9_BRAFL
Uncharacterized protein.
    
 0.657
C3YI34_BRAFL
Uncharacterized protein.
   
 0.624
C3YDQ8_BRAFL
Mothers against decapentaplegic homolog.
     
 0.612
C3YZT7_BRAFL
Uncharacterized protein.
    
 
 0.607
C3YQX9_BRAFL
XPA_C domain-containing protein.
     
 0.601
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.