STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z548_BRAFLF-box domain-containing protein. (645 aa)    
Predicted Functional Partners:
C3YP57_BRAFL
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.877
C3YB87_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.837
C3XXN0_BRAFL
RING-type domain-containing protein.
    
 0.811
C3ZRF6_BRAFL
Ubiquitin-like domain-containing protein.
    
 0.721
C3YTV2_BRAFL
TIP120 domain-containing protein.
    
 0.700
C3ZV93_BRAFL
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.689
C3YSG4_BRAFL
COMM domain-containing protein.
    
 0.663
C3YVJ7_BRAFL
E2_bind domain-containing protein.
     
 0.639
C3Z0Y5_BRAFL
NEDD8-activating enzyme E1 regulatory subunit.
     
 0.639
C3ZXV9_BRAFL
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.625
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.