STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z5F3_BRAFLUncharacterized protein. (791 aa)    
Predicted Functional Partners:
C3YLS0_BRAFL
Uncharacterized protein.
  
  
 
0.906
C3YVY6_BRAFL
RECA_2 domain-containing protein.
  
 
 0.906
C3YWX1_BRAFL
DUF3535 domain-containing protein.
 
 
 
 0.795
C3ZUG4_BRAFL
SANT domain-containing protein.
 
 
 
 0.741
C3YFL7_BRAFL
Vac14_Fab1_bd domain-containing protein.
 
  
   0.715
C3XRP0_BRAFL
Uncharacterized protein.
   
 0.696
C3Z3N5_BRAFL
Spc7 domain-containing protein.
  
 
 0.653
C3YAW6_BRAFL
F-box domain-containing protein.
   
 
 0.620
C3YTV5_BRAFL
Uncharacterized protein; Belongs to the actin family.
    
 0.540
C3YLP2_BRAFL
RuvB-like helicase; Belongs to the RuvB family.
    
 0.535
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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