STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z5Z4_BRAFLUncharacterized protein. (338 aa)    
Predicted Functional Partners:
C3ZL87_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.906
C3ZBU4_BRAFL
Uncharacterized protein.
  
 
 0.894
C3YC16_BRAFL
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 0.893
C3ZH65_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.887
C3Y932_BRAFL
Uncharacterized protein.
   
 
 0.886
C3YPT7_BRAFL
Nudix hydrolase domain-containing protein.
   
 
 0.886
C3ZL89_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.886
C3Z9L9_BRAFL
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.885
C3XRL0_BRAFL
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.884
C3ZWA4_BRAFL
Uncharacterized protein.
  
 
 0.883
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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