STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z6B4_BRAFLUncharacterized protein. (225 aa)    
Predicted Functional Partners:
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.991
C3Y2R6_BRAFL
PIP49_N domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.896
C3YG89_BRAFL
Uncharacterized protein.
   
 
 0.895
C3ZEN8_BRAFL
Ribosomal_L2_C domain-containing protein.
   
 
 0.887
C3Z7J3_BRAFL
Ribosomal_L16 domain-containing protein.
   
 
 0.885
C3Z8T3_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.884
C3Y4R0_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.883
C3YD43_BRAFL
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.883
C3ZTF1_BRAFL
Uncharacterized protein.
   
 
 0.880
C3XQF5_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
   0.879
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.