STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z6V7_BRAFLThioredox_DsbH domain-containing protein. (741 aa)    
Predicted Functional Partners:
C3ZXJ5_BRAFL
Thymidylat_synt domain-containing protein.
    
  0.891
C3XVJ7_BRAFL
FAD_binding_3 domain-containing protein.
    
  0.868
C3Y1Q5_BRAFL
Porphobil_deam domain-containing protein.
    
  0.868
C3XRA7_BRAFL
Uncharacterized protein.
      
 0.538
C3YBV1_BRAFL
Uncharacterized protein.
     
 0.518
C3ZCR5_BRAFL
tRNA pseudouridine synthase.
      
 0.512
C3XWE5_BRAFL
Calponin-homology (CH) domain-containing protein.
      
 0.489
C3ZLC0_BRAFL
PWI domain-containing protein.
      
 0.476
C3XZK6_BRAFL
Uncharacterized protein.
      
 0.450
C3ZKG5_BRAFL
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.443
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.