STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z7U0_BRAFLDNA_mis_repair domain-containing protein. (429 aa)    
Predicted Functional Partners:
C3Y458_BRAFL
DNA_mis_repair domain-containing protein.
  
 
0.994
C3XTK2_BRAFL
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.992
C3YMN6_BRAFL
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.989
C3Z7T8_BRAFL
MutL_C domain-containing protein.
 
  
  0.967
C3Y2A0_BRAFL
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.901
C3Z1V1_BRAFL
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.872
C3Y299_BRAFL
Uncharacterized protein.
 
      0.859
C3ZRF2_BRAFL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.816
C3Z4R4_BRAFL
TPR_REGION domain-containing protein.
   
 0.765
C3Z734_BRAFL
Uncharacterized protein.
   
 0.765
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.