STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z9F1_BRAFLMACPF domain-containing protein. (697 aa)    
Predicted Functional Partners:
C3Y3Y2_BRAFL
LRRCT domain-containing protein.
  
    0.546
C3XQI2_BRAFL
Uncharacterized protein.
  
    0.522
C3Z092_BRAFL
C2H2-type domain-containing protein.
  
     0.520
C3ZLV5_BRAFL
Uncharacterized protein.
  
     0.517
C3YDF0_BRAFL
B30.2/SPRY domain-containing protein.
  
     0.515
C3Z4S3_BRAFL
Death domain-containing protein.
  
     0.514
C3ZWC0_BRAFL
Uncharacterized protein.
  
     0.512
C3ZXT2_BRAFL
Uncharacterized protein.
  
     0.506
C3YL85_BRAFL
Uncharacterized protein.
  
     0.495
C3XQJ6_BRAFL
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
  
     0.481
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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