STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZA91_BRAFLUncharacterized protein. (398 aa)    
Predicted Functional Partners:
C3YJ26_BRAFL
AFP-like domain-containing protein.
     
 0.906
C3Y3K5_BRAFL
BcrAD_BadFG domain-containing protein.
     
 0.905
C3XR13_BRAFL
Uncharacterized protein.
   
 
  0.901
C3XRC7_BRAFL
Epimerase_2 domain-containing protein.
     
 0.900
C3Z1I6_BRAFL
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
     
  0.900
C3Z1P9_BRAFL
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
     
  0.900
C3ZTK3_BRAFL
Epimerase_2 domain-containing protein.
     
 0.900
C3XQ82_BRAFL
V-SNARE coiled-coil homology domain-containing protein.
   
 0.633
C3ZAP3_BRAFL
ATP-grasp domain-containing protein.
   
 
 0.523
C3ZP65_BRAFL
V-SNARE coiled-coil homology domain-containing protein.
   
 0.491
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (26%) [HD]