STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZB76_BRAFLC1q domain-containing protein. (267 aa)    
Predicted Functional Partners:
C3YLH2_BRAFL
C-type lectin domain-containing protein.
  
 
   0.533
C3YK40_BRAFL
H_lectin domain-containing protein.
  
     0.532
C3YSQ6_BRAFL
Uncharacterized protein.
  
     0.528
C3YLH3_BRAFL
C-type lectin domain-containing protein.
  
     0.527
C3YMU9_BRAFL
C-type lectin domain-containing protein.
  
     0.527
C3Z6N2_BRAFL
Uncharacterized protein.
  
     0.526
C3YK55_BRAFL
Uncharacterized protein.
  
     0.525
C3ZM63_BRAFL
Uncharacterized protein.
  
     0.524
C3YM89_BRAFL
DDE_Tnp_1_7 domain-containing protein.
  
     0.523
C3ZJF6_BRAFL
Uncharacterized protein.
  
     0.522
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.