STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZB90_BRAFLUncharacterized protein. (1629 aa)    
Predicted Functional Partners:
C3XW58_BRAFL
Uncharacterized protein.
   
 0.999
C3Z7Q9_BRAFL
NOT2_3_5 domain-containing protein.
   
 0.999
C3ZB61_BRAFL
Uncharacterized protein.
    
 0.999
C3ZN89_BRAFL
Uncharacterized protein.
    
 0.999
C3ZHC7_BRAFL
Uncharacterized protein.
    
 0.993
C3XZF5_BRAFL
Uncharacterized protein.
   
 0.991
C3YWD4_BRAFL
Not3 domain-containing protein.
    
 0.986
C3YWD5_BRAFL
NOT2_3_5 domain-containing protein.
    
 0.986
C3YKW9_BRAFL
Endo/exonuclease/phosphatase domain-containing protein.
   
 0.980
C3ZB91_BRAFL
CNOT1_HEAT domain-containing protein.
 
  
  0.974
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.