STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZD95_BRAFLUncharacterized protein. (499 aa)    
Predicted Functional Partners:
C3Y9F3_BRAFL
Uncharacterized protein.
   
 0.998
C3Y5K6_BRAFL
DNA polymerase.
    
 0.993
C3ZVR8_BRAFL
HORMA domain-containing protein.
    
 0.983
C3YI96_BRAFL
DNA polymerase.
    
 0.972
C3YI97_BRAFL
DNA_pol_B_exo1 domain-containing protein.
    
 0.972
C3ZRF2_BRAFL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.962
C3ZKB8_BRAFL
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.957
C3ZEE6_BRAFL
DNA polymerase.
    
 0.858
C3ZJN9_BRAFL
Uncharacterized protein.
    
 0.854
C3YEL6_BRAFL
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.820
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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