STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZDR4_BRAFLUncharacterized protein. (1316 aa)    
Predicted Functional Partners:
C3Z5Z2_BRAFL
HORMA domain-containing protein.
   
 0.557
C3Y9G8_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
 0.533
C3XTJ3_BRAFL
TFIID_20kDa domain-containing protein.
   
 0.526
C3Z8G3_BRAFL
Ipi1_N domain-containing protein.
   
 0.526
C3YVK1_BRAFL
Uncharacterized protein.
    
 0.523
C3XPP3_BRAFL
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.522
C3YK31_BRAFL
Uncharacterized protein.
   
 0.513
C3Y3A3_BRAFL
Uncharacterized protein.
   
 0.508
C3Y9K6_BRAFL
Uncharacterized protein.
    
 0.507
C3Y3B5_BRAFL
RanBD1 domain-containing protein.
   
 0.506
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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