STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZF04_BRAFLArf-GAP domain-containing protein. (479 aa)    
Predicted Functional Partners:
C3ZCC0_BRAFL
Uncharacterized protein.
   
 0.964
C3ZXG3_BRAFL
Arf-GAP domain-containing protein.
    
0.939
C3Y2F0_BRAFL
Uncharacterized protein.
     
0.902
C3YRJ2_BRAFL
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.828
C3Z641_BRAFL
Uncharacterized protein.
    
 0.786
C3Z642_BRAFL
Sec7_N domain-containing protein.
    
 0.786
C3ZXH9_BRAFL
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 0.786
C3Y4G5_BRAFL
t-SNARE coiled-coil homology domain-containing protein.
     
 0.768
C3YU04_BRAFL
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 
 0.756
C3YJD5_BRAFL
ER lumen protein-retaining receptor.
    
 0.748
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.