STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZFT7_BRAFLUncharacterized protein. (2876 aa)    
Predicted Functional Partners:
C3Y8L9_BRAFL
Lysine--tRNA ligase.
  
    0.467
C3XQH1_BRAFL
PfkB domain-containing protein.
  
  
 0.443
C3XR96_BRAFL
PfkB domain-containing protein.
  
  
 0.443
C3XYY9_BRAFL
Uncharacterized protein.
  
 
 0.424
C3Y252_BRAFL
Uncharacterized protein.
  
 
 0.424
C3Y2B3_BRAFL
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.411
C3Y5A6_BRAFL
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.411
C3ZFZ4_BRAFL
CTP_transf_like domain-containing protein.
   
 
 0.411
C3ZIC0_BRAFL
Protein-S-isoprenylcysteine O-methyltransferase.
     
 0.407
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.