STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZGB8_BRAFLUncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (1849 aa)    
Predicted Functional Partners:
C3YUD0_BRAFL
Cyclic nucleotide-binding domain-containing protein.
   
0.988
C3ZSF0_BRAFL
WD_REPEATS_REGION domain-containing protein.
      
 0.687
C3YJ14_BRAFL
Sec8_exocyst domain-containing protein.
     
 0.664
C3YWJ9_BRAFL
FIP-RBD domain-containing protein.
     
 0.653
C3XUC7_BRAFL
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
     
 0.650
C3YMP9_BRAFL
Uncharacterized protein.
     
 0.588
C3YMK8_BRAFL
Uncharacterized protein.
   
 0.575
C3XR39_BRAFL
RHD domain-containing protein.
      
 0.572
C3Z8B2_BRAFL
Guanylate cyclase.
   
 
 0.556
C3Y0W1_BRAFL
Uncharacterized protein.
   
  
 0.549
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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