STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZGP3_BRAFLUncharacterized protein. (288 aa)    
Predicted Functional Partners:
C3ZN97_BRAFL
PKD_channel domain-containing protein.
 
 
   0.721
C3ZGQ0_BRAFL
PKD_channel domain-containing protein.
 
  
   0.690
C3Y3N9_BRAFL
PKD_channel domain-containing protein.
 
 
   0.683
C3ZGR4_BRAFL
PKD_channel domain-containing protein.
 
  
   0.569
C3YK08_BRAFL
Uncharacterized protein.
 
 
   0.470
C4A0G1_BRAFL
PKD_channel domain-containing protein.
  
 
   0.459
C3ZN54_BRAFL
Uncharacterized protein.
  
 
   0.456
C3ZQD3_BRAFL
PKD_channel domain-containing protein.
  
 
   0.441
C3ZY52_BRAFL
Uncharacterized protein.
  
 
   0.435
C3ZGP0_BRAFL
PKD_channel domain-containing protein.
 
 
   0.414
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.