STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZHJ9_BRAFLFERM domain-containing protein. (316 aa)    
Predicted Functional Partners:
C3Y7R3_BRAFL
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.952
C3ZAU5_BRAFL
Uncharacterized protein.
 
      0.803
C3Y052_BRAFL
Uncharacterized protein.
 
 
   
0.701
C3ZA69_BRAFL
FERM domain-containing protein.
     
0.585
C3Z0H4_BRAFL
Uncharacterized protein.
 
  
 0.541
C3YPX6_BRAFL
FERM domain-containing protein.
     
0.481
C3XQU0_BRAFL
LAM_G_DOMAIN domain-containing protein.
     
 0.461
C3XQU1_BRAFL
Uncharacterized protein.
     
 0.461
C3Y019_BRAFL
Protein kinase domain-containing protein.
   
 
 0.449
C3Y018_BRAFL
CaMKII_AD domain-containing protein.
   
 
 0.448
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.