STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZJI0_BRAFLSignal peptidase complex catalytic subunit SEC11. (179 aa)    
Predicted Functional Partners:
C3ZEV0_BRAFL
Uncharacterized protein.
   
 0.996
C3YRN3_BRAFL
Uncharacterized protein.
   
 0.995
C3XXI4_BRAFL
Signal peptidase complex subunit 3.
   
 0.994
C3ZQZ0_BRAFL
Uncharacterized protein.
 
 
    0.893
C3YJ03_BRAFL
Uncharacterized protein.
     
 0.779
C3YZ04_BRAFL
Uncharacterized protein; Belongs to the peptidase S9B family.
   
 
 0.735
C3XUN6_BRAFL
J domain-containing protein.
   
 
 0.715
C3Z2L1_BRAFL
Uncharacterized protein.
    
 0.702
C3YFY7_BRAFL
Uncharacterized protein.
   
 
  0.682
C3Z0C7_BRAFL
Ig-like domain-containing protein.
   
 
  0.682
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.