STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZJQ8_BRAFLRING-type domain-containing protein. (267 aa)    
Predicted Functional Partners:
C3Y726_BRAFL
Uncharacterized protein.
    
 0.652
C3ZV93_BRAFL
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.651
C3Y7L2_BRAFL
INCENP_ARK-bind domain-containing protein.
   
 0.573
C3ZNP8_BRAFL
Protein kinase domain-containing protein.
   
 0.531
C3Z725_BRAFL
PPM-type phosphatase domain-containing protein.
    
 0.520
C3Y8G6_BRAFL
Death domain-containing protein.
   
 0.503
C3YPF5_BRAFL
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.474
C3Y0R3_BRAFL
Uncharacterized protein.
    
 0.469
C3Y2C9_BRAFL
Uncharacterized protein.
   
 0.468
C3YZR5_BRAFL
Uncharacterized protein.
   
 0.468
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.