STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZK04_BRAFLELYS domain-containing protein. (1093 aa)    
Predicted Functional Partners:
C3Y6F0_BRAFL
Uncharacterized protein.
   
 0.998
C3XRH9_BRAFL
Nucleoporin_C domain-containing protein.
   
 0.968
C3Y7A7_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
 0.964
C3Z1R7_BRAFL
Uncharacterized protein.
   
 0.964
C3Y917_BRAFL
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.963
C3XWA2_BRAFL
Peptidase S59 domain-containing protein.
   
 0.962
C3YVL3_BRAFL
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.962
C3YXC1_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
 0.962
C3ZDE1_BRAFL
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.957
C3YM21_BRAFL
Uncharacterized protein.
   
 0.951
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (26%) [HD]