STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZKQ7_BRAFLTPR_REGION domain-containing protein. (506 aa)    
Predicted Functional Partners:
C3Z2B9_BRAFL
BBS1 domain-containing protein.
   
 0.996
C3XU54_BRAFL
Bardet-Biedl syndrome 2 protein homolog.
  
 0.995
C3XXL3_BRAFL
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
  
 0.995
C3YE92_BRAFL
Uncharacterized protein.
    
 0.994
C3YBX4_BRAFL
Uncharacterized protein.
  
 0.974
C3YEG9_BRAFL
Uncharacterized protein.
   
 0.965
C3ZYE3_BRAFL
Uncharacterized protein.
   
 0.965
C3YW88_BRAFL
Uncharacterized protein.
    
 0.936
C3Z9M1_BRAFL
BTB domain-containing protein.
   
 0.934
C3YN59_BRAFL
Uncharacterized protein.
   
 0.830
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (18%) [HD]