STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZLB6_BRAFLUncharacterized protein. (637 aa)    
Predicted Functional Partners:
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.851
C3YNV4_BRAFL
Uncharacterized protein.
   
 0.785
C3XU90_BRAFL
Uncharacterized protein.
   
 0.769
C3YGP6_BRAFL
Uncharacterized protein.
   
 0.700
C3Y608_BRAFL
RRM domain-containing protein.
   
 0.644
C3YGH1_BRAFL
RRM domain-containing protein.
   
 0.644
C3Z3S9_BRAFL
RRM domain-containing protein.
   
 0.642
C3XZ88_BRAFL
Uncharacterized protein.
   
 
 0.635
C3XVM2_BRAFL
Uncharacterized protein.
   
 0.633
C3XVM3_BRAFL
Uncharacterized protein.
   
 0.633
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.