STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZMA7_BRAFLUncharacterized protein; Belongs to the peptidase M24B family. (669 aa)    
Predicted Functional Partners:
C3Z9B8_BRAFL
Uncharacterized protein; Belongs to the BolA/IbaG family.
   
 
 0.511
C3XZ88_BRAFL
Uncharacterized protein.
  
  
 0.503
C3YXK9_BRAFL
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
       0.493
C3ZG50_BRAFL
Uncharacterized protein; Belongs to the peptidase M18 family.
   
 
 0.438
C3Y721_BRAFL
Eukaryotic translation initiation factor 5A.
  
 
 0.426
C3ZQC8_BRAFL
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
   
 
 0.410
C3Y1M9_BRAFL
Uncharacterized protein.
  
 0.409
C3Y1N0_BRAFL
Uncharacterized protein.
  
 0.409
C3Y1N1_BRAFL
Uncharacterized protein.
  
 0.409
C3XU70_BRAFL
Uncharacterized protein.
  
 0.408
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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